Bug
- [SYSMO-149] - Drop down box for tags does not display correctly with IE8
- [SYSMO-169] - Search response :notice lingers on next click
- [SYSMO-170] - Upgrading to rails 2.3.4 means fixtures ID's have changed, affecting importing default data
- [SYSMO-172] - Upload / New gadget button doesn't work from new Model page
- [SYSMO-184] - Data files aren't displayed under Studies and Investigations, if they have an associated assay.
- [SYSMO-185] - Tags aren't added unless you hit enter or comma after typing it.
- [SYSMO-192] - Assay (and possible other) descriptions are truncated to 255 characters
- [SYSMO-193] - Order of the Tabs generated by tabber is inconsitent
- [SYSMO-194] - while creating a new assay the drop down menu for available studies is too long (as long as the longest title).
- [SYSMO-195] - Uncrecognised local variable "organism" for Sop when re-indexing solr
- [SYSMO-196] - Mailer unit test occasionally fails because of timestamp differences
- [SYSMO-197] - Check that the model run is the version displayed
- [SYSMO-199] - The download for model always downloads the current version
- [SYSMO-200] - Show latest version on DataFile & Model resource_list_item (like for SOP)
- [SYSMO-207] - Duplicate measurements_items for experimental conditaions & factors studied.
Improvement
- [SYSMO-157] - Only show Sops and Data file for the users projects in Assay form - with a tick box to show all.
- [SYSMO-161] - Create rake task to update all controlled vocabularies in 1 shot
- [SYSMO-162] - Show recent changes and version in seek interface, with a link from the home page.
- [SYSMO-165] - Cache favourites gadget
- [SYSMO-167] - Allow a user to create new Model type, format or environment
- [SYSMO-186] - Move the Data tab back together with Models and SOPs
- [SYSMO-188] - Display URL as links in all descriptions
- [SYSMO-191] - Setting up a demo system
- [SYSMO-198] - Add rel="nofollow" to user contributed links
New Feature
- [SYSMO-136] - Versioning of Model, Sops and DataFiles
Refinement
- [SYSMO-61] - Favourite Groups: AJAX requests should return status 422 instead of 403 (when a duplicated favourite group name is encountered)
- [SYSMO-168] - Update to rails 2.3.4
- [SYSMO-208] - Add <PAL> icon next to official pals in their resource list item and profile
- [SYSMO-209] - Show pals on project page
Task
- [SYSMO-189] - Create a PAL only page for manipulating assay_types and technology_types
Sub-task
- [SYSMO-173] - Add support for uploading a new SOP
- [SYSMO-174] - Correct download link to download the displayed version
- [SYSMO-175] - Add support for switching between displayed versions (unless there is only 1 version)
- [SYSMO-176] - Replicate SOP versioning for Models (leave Datafiles for the time being)
- [SYSMO-178] - Create a new set of Experimental Conditions, copy the old ones and link to the new sop version
- [SYSMO-179] - Support revision comments
- [SYSMO-180] - Make Assays link to the version of a SOP as it was at the time the Assay was created
- [SYSMO-183] - Validate that a file has been selected, and check the data stream exists in the controller, flashing [:error] if not
- [SYSMO-213] - Update DataFIles to support versioning